Blogs

Big Data Regional Innovation Hubs: Establishing Spokes to Advance Big Data Applications (BD Spokes)

  • Posted on: 18 April 2017
  • By: nblouin

https://www.nsf.gov/funding/pgm_summ.jsp?pims_id=505264

Solicitation 17-546

Important Information for Proposers

A revised version of the NSF Proposal & Award Policies & Procedures Guide (PAPPG) (NSF 17-1), is effective for proposals submitted, or due, on or after January 30, 2017. Please be advised that, depending on the specified due date, the guidelines contained in NSF 17-1 may apply to proposals submitted in response to this funding opportunity.

DUE DATES

ARCC interns are available for computing help too!

  • Posted on: 14 February 2017
  • By: nblouin

ARRC interns have specialities in computer programming and workflow design or optimization. Check them out:

Name Specialty Available hours
Uday Midah OpenMP and MPI Mondays: 10:00 AM - 12:00 PM, Tuesdays: 10:00 AM - 12:00 PM, Wednesdays: 10:00 AM - 12:00 PM, Thursdays: 10:00 AM - 12:00 PM, Fridays: 10:00 AM - 12:00 PM
Karan Sodhi Scripting and general workflows

New iMac and Geneious v10 Available in MOLBIO

  • Posted on: 13 February 2017
  • By: vikram

INBRE has purchased a new iMac for community use available in Molecular Biology Room 269. We have also purchased a standalone license to Geneious Version 10 which is being hosted on this iMac.

Geneious has an excellent user manual available here: https://assets.geneious.com/documentation/geneious/GeneiousManual.pdf

RNAseq: Biological replicates vs sequencing depth

  • Posted on: 9 September 2016
  • By: vikram

If you are gearing up to do a RNAseq experiment and wondering if you should sequence deeper or sequence more biological replicates, this article - which I find still relevant - would be very useful.

RNA-seq differential expression studies: more sequence, or more replication?
Liu, Zhou and White 2013
http://bioinformatics.oxfordjournals.org/content/early/2013/12/06/bioinf...

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